<h1 id="09"><a aria-hidden="true" class="anchor-heading icon-link" href="#09"></a>09</h1>
<h1 id="group-meeting-20230309"><a aria-hidden="true" class="anchor-heading icon-link" href="#group-meeting-20230309"></a>Group meeting 2023.03.09</h1>
<p>Present : </p>
<ul>
<li>Lëndita</li>
<li>Maëlle </li>
<li>Marco</li>
<li>PM</li>
<li>Stéphanie</li>
</ul>
<h1 id="program"><a aria-hidden="true" class="anchor-heading icon-link" href="#program"></a>Program</h1>
<p>Short (from 10 - 20 min) presentation of everybody's project with some background</p>
<ul>
<li>Maëlle </li>
<li>Marco</li>
<li>Lëndita</li>
<li>Stéphanie</li>
</ul>
<h1 id="notes"><a aria-hidden="true" class="anchor-heading icon-link" href="#notes"></a>Notes</h1>
<h2 id="marco"><a aria-hidden="true" class="anchor-heading icon-link" href="#marco"></a>Marco</h2>
<p>Told us :</p>
<blockquote>
<p>never say that the probability is one !</p>
</blockquote>
<h2 id="lëndita"><a aria-hidden="true" class="anchor-heading icon-link" href="#lëndita"></a>Lëndita</h2>
<ul>
<li>Switch from the "cutting" pilot to testing the effects of repeated freeze-drying cycle.</li>
<li>Take Datawarrior to explore the <a href="https://github.com/digital-botanical-gardens-initiative/taxonomical-preparator/blob/main/data/out/species_list_croisee_final.csv">https://github.com/digital-botanical-gardens-initiative/taxonomical-preparator/blob/main/data/out/species_list_croisee_final.csv</a>
This can be used for preparing plots (e.g. what is the taxonomical composition of the Serre 1 ?)</li>
</ul>
<h2 id="pm"><a aria-hidden="true" class="anchor-heading icon-link" href="#pm"></a>PM</h2>
<p>Checked with everybody and Wednesday mornings should be OK.</p>
<p>Check prices of : </p>
<ul>
<li>lyophilisator</li>
<li>1mg precision scale</li>
</ul>

Concrete steps to access and contribute to the DBGI Dendron


![](/assets/images/allard-lab.jpg)

Welcome the the COMMONS Lab Open Dendron !

In the [COMMONS Lab](https://www.unifr.ch/bio/en/groups/allard/) we intent to follow the [Open Notebook Science](https://en.wikipedia.org/wiki/Open-notebook_science) approach to document our research.

For this we use the [Dendron](https://www.dendron.so/) system as a mean to efficiently capture notes and publish them.

## What is this note

This note is a succinct tutorial note aiming to get you started in the use of the COMMONS Lab Dendron.

## Tutorial

### Dendron. 

#### What is Dendron ?

> Dendron is an open-source, local-first, markdown-based, note-taking tool. Think of it as a cache for everything that you care about - if you've spent more then five minutes solving a problem, you should never spent any more time solving the same exact problem.
> 
> Dendron is a knowledge base built by and for developers and integrates natively with IDEs like VS Code and VSCodium.

#### Where to get more info on Dendron ?

- You can get more information in the Dendron system at the official website www.dendron.so
- All the Dendron documentation is hosted here https://wiki.dendron.so/. It is, obviously, a Dendron itself.

#### Concrete steps to access and contribute to the DBGI Dendron

1. Install [VSCode](https://code.visualstudio.com/download)
2. Install [Dendron](https://marketplace.visualstudio.com/items?itemName=dendron.dendron) from the VSCode marketplace 
3. Clone the COMMONS Dendron repo

    In your terminal
    ```
    git clone https://github.com/commons-research/commons-dws-public.git
    ```
4. In VSCode open (File/Open) the cloned repository.
5. Voila ! You should now be in the COMMONS Lab Open Dendron.

Feel free to explore and contribute.
A first, important step could be to configure VSCode so that you can easily add a daily note. See steps described at [[open-notebook.commons.setup]]


## Questions, comments, suggestions ?

Feel free to contribute here https://github.com/orgs/commons-research/discussions

