<h1 id="km"><a aria-hidden="true" class="anchor-heading icon-link" href="#km"></a>Km</h1>
<h1 id="dbpedia"><a aria-hidden="true" class="anchor-heading icon-link" href="#dbpedia"></a>DBpedia</h1>
<p>check in <a href="https://fr.wikipedia.org/wiki/DBpedia">https://fr.wikipedia.org/wiki/DBpedia</a></p>
<h1 id="tarql"><a aria-hidden="true" class="anchor-heading icon-link" href="#tarql"></a>Tarql</h1>
<p><a href="http://tarql.github.io/">http://tarql.github.io/</a></p>
<p>SPARQL for Tables: Turn CSV into RDF using SPARQL syntax</p>
<p><a href="https://knotation.org/">https://knotation.org/</a></p>
<p><a href="http://robot.obolibrary.org/">http://robot.obolibrary.org/</a></p>
<h1 id="rdf"><a aria-hidden="true" class="anchor-heading icon-link" href="#rdf"></a>RDF</h1>
<h2 id="convert-csv-to-rdf"><a aria-hidden="true" class="anchor-heading icon-link" href="#convert-csv-to-rdf"></a>convert csv to RDF</h2>
<p><a href="https://stackoverflow.com/questions/43524943/creating-rdf-file-using-csv-file-as-input">https://stackoverflow.com/questions/43524943/creating-rdf-file-using-csv-file-as-input</a></p>
<p>check in RDFlib</p>
<p><a href="https://rdflib.readthedocs.io/en/stable/index.html">https://rdflib.readthedocs.io/en/stable/index.html</a></p>
<h2 id="graphdb-ressources"><a aria-hidden="true" class="anchor-heading icon-link" href="#graphdb-ressources"></a>GraphDB ressources</h2>
<p><a href="https://graphdb.ontotext.com/free/devhub/ontologies.html?utm_campaign=GraphDB&#x26;utm_medium=email&#x26;_hsmi=101117907&#x26;_hsenc=p2ANqtz-_P3Mf-7bSerJeAWtWCXHAZCx1giPfGzHa47wQ142kn_amyTL8j2BVL7Od06EHFGR9oDXhIsdHaUL4Ln1hALrq7yMChlQ&#x26;utm_content=101117907&#x26;utm_source=hs_automation">https://graphdb.ontotext.com/free/devhub/ontologies.html?utm_campaign=GraphDB&#x26;utm_medium=email&#x26;_hsmi=101117907&#x26;_hsenc=p2ANqtz-_P3Mf-7bSerJeAWtWCXHAZCx1giPfGzHa47wQ142kn_amyTL8j2BVL7Od06EHFGR9oDXhIsdHaUL4Ln1hALrq7yMChlQ&#x26;utm_content=101117907&#x26;utm_source=hs_automation</a></p>
<h1 id="semantic-markdown"><a aria-hidden="true" class="anchor-heading icon-link" href="#semantic-markdown"></a>Semantic markdown</h1>
<p><a href="http://blog.sparna.fr/2020/02/20/semantic-markdown/">http://blog.sparna.fr/2020/02/20/semantic-markdown/</a></p>
<h1 id="indra-labs"><a aria-hidden="true" class="anchor-heading icon-link" href="#indra-labs"></a>INDRA labs</h1>
<p><a href="https://indralab.github.io/">https://indralab.github.io/</a></p>
<h1 id="tiago-lubiana"><a aria-hidden="true" class="anchor-heading icon-link" href="#tiago-lubiana"></a>Tiago Lubiana</h1>
<p><a href="https://pointstodots.wordpress.com/2021/05/15/intro/">https://pointstodots.wordpress.com/2021/05/15/intro/</a></p>
<h1 id="linking-different-knowledge-graphs-together"><a aria-hidden="true" class="anchor-heading icon-link" href="#linking-different-knowledge-graphs-together"></a>Linking different knowledge graphs together</h1>
<p><a href="http://www.bobdc.com/blog/linkingkgs/">http://www.bobdc.com/blog/linkingkgs/</a></p>
<h1 id="bob-ducharme"><a aria-hidden="true" class="anchor-heading icon-link" href="#bob-ducharme"></a>Bob DuCharme</h1>
<p><a href="http://www.bobdc.com/blog/">http://www.bobdc.com/blog/</a></p>

Linking different knowledge graphs together

Concrete steps to access and contribute to the DBGI Dendron


![](/assets/images/allard-lab.jpg)

Welcome the the COMMONS Lab Open Dendron !

In the [COMMONS Lab](https://www.unifr.ch/bio/en/groups/allard/) we intent to follow the [Open Notebook Science](https://en.wikipedia.org/wiki/Open-notebook_science) approach to document our research.

For this we use the [Dendron](https://www.dendron.so/) system as a mean to efficiently capture notes and publish them.

## What is this note

This note is a succinct tutorial note aiming to get you started in the use of the COMMONS Lab Dendron.

## Tutorial

### Dendron. 

#### What is Dendron ?

> Dendron is an open-source, local-first, markdown-based, note-taking tool. Think of it as a cache for everything that you care about - if you've spent more then five minutes solving a problem, you should never spent any more time solving the same exact problem.
> 
> Dendron is a knowledge base built by and for developers and integrates natively with IDEs like VS Code and VSCodium.

#### Where to get more info on Dendron ?

- You can get more information in the Dendron system at the official website www.dendron.so
- All the Dendron documentation is hosted here https://wiki.dendron.so/. It is, obviously, a Dendron itself.

#### Concrete steps to access and contribute to the DBGI Dendron

1. Install [VSCode](https://code.visualstudio.com/download)
2. Install [Dendron](https://marketplace.visualstudio.com/items?itemName=dendron.dendron) from the VSCode marketplace 
3. Clone the COMMONS Dendron repo

    In your terminal
    ```
    git clone https://github.com/commons-research/commons-dws-public.git
    ```
4. In VSCode open (File/Open) the cloned repository.
5. Voila ! You should now be in the COMMONS Lab Open Dendron.

Feel free to explore and contribute.
A first, important step could be to configure VSCode so that you can easily add a daily note. See steps described at [[open-notebook.commons.setup]]


## Questions, comments, suggestions ?

Feel free to contribute here https://github.com/orgs/commons-research/discussions

