<h1 id="pkm"><a aria-hidden="true" class="anchor-heading icon-link" href="#pkm"></a>Pkm</h1>
<p># Personal Knowledge Management</p>
<p><a href="https://pkm.dendron.so/">https://pkm.dendron.so/</a></p>
<h1 id="link-paper-and-digital"><a aria-hidden="true" class="anchor-heading icon-link" href="#link-paper-and-digital"></a>Link paper and digital</h1>
<p>(ZK imported)</p>
<p>And also a first attempt to link paper and digital ZK #6_93_V (or dendron or whatever digital pkm system). So here in dendron tag would be <a title="Private" href="https://wiki.dendron.so/notes/hfyvYGJZQiUwQaaxQO27q.html" target="_blank" class="private">6_93_V (Private)</a></p>
<p>The first digit correspond to the notebook number. The second one to the page number. Here Notebook 6 page 93. The letter corresponds to : </p>
<ul>
<li>Live List (L)</li>
<li>The Vault (V)</li>
<li>Notes (N)</li>
</ul>
<p>Notebooks are following the strikethru system <a href="https://www.kickstarter.com/projects/chriskyle/strikethru-the-to-do-list-notebook-0">https://www.kickstarter.com/projects/chriskyle/strikethru-the-to-do-list-notebook-0</a>
I am on my 8th notebook using the stikethru system so I guess it's a match for me (lets see how it goes with dendron, the time you stick to a tool seems to be a good measure of it's usefulness. Sometimes you get pretty excited about flashy tools with all the bells and whistle be if you drop them after a week, you know they might not worth investing much more time)</p>
<ul class="contains-task-list">
<li class="task-list-item"><input type="checkbox" disabled> investigate more on digital / analogue links in various domains (note taking, pkm). Maybe more widely also, explore links between these two whole "worlds". Thinking about it it is actually the very core definition of bioinformatics. A discipline which is by essence at the interface of analogue and digital worlds ... </li>
</ul>
<h1 id="obsidian-thread"><a aria-hidden="true" class="anchor-heading icon-link" href="#obsidian-thread"></a>Obsidian thread</h1>
<p><a href="https://forum.obsidian.md/t/cataloging-classification-information-science-pkms-and-you/10071">https://forum.obsidian.md/t/cataloging-classification-information-science-pkms-and-you/10071</a></p>

Concrete steps to access and contribute to the DBGI Dendron


![](/assets/images/allard-lab.jpg)

Welcome the the COMMONS Lab Open Dendron !

In the [COMMONS Lab](https://www.unifr.ch/bio/en/groups/allard/) we intent to follow the [Open Notebook Science](https://en.wikipedia.org/wiki/Open-notebook_science) approach to document our research.

For this we use the [Dendron](https://www.dendron.so/) system as a mean to efficiently capture notes and publish them.

## What is this note

This note is a succinct tutorial note aiming to get you started in the use of the COMMONS Lab Dendron.

## Tutorial

### Dendron. 

#### What is Dendron ?

> Dendron is an open-source, local-first, markdown-based, note-taking tool. Think of it as a cache for everything that you care about - if you've spent more then five minutes solving a problem, you should never spent any more time solving the same exact problem.
> 
> Dendron is a knowledge base built by and for developers and integrates natively with IDEs like VS Code and VSCodium.

#### Where to get more info on Dendron ?

- You can get more information in the Dendron system at the official website www.dendron.so
- All the Dendron documentation is hosted here https://wiki.dendron.so/. It is, obviously, a Dendron itself.

#### Concrete steps to access and contribute to the DBGI Dendron

1. Install [VSCode](https://code.visualstudio.com/download)
2. Install [Dendron](https://marketplace.visualstudio.com/items?itemName=dendron.dendron) from the VSCode marketplace 
3. Clone the COMMONS Dendron repo

    In your terminal
    ```
    git clone https://github.com/commons-research/commons-dws-public.git
    ```
4. In VSCode open (File/Open) the cloned repository.
5. Voila ! You should now be in the COMMONS Lab Open Dendron.

Feel free to explore and contribute.
A first, important step could be to configure VSCode so that you can easily add a daily note. See steps described at [[open-notebook.commons.setup]]


## Questions, comments, suggestions ?

Feel free to contribute here https://github.com/orgs/commons-research/discussions

