Abbreviations

Keywords

NP - Natural Products
DNP - Dictionary of Natural Products (commercially available effors for comiling NP data - https://dnp.chemnetbase.com/)
LNPN - LOTUS database
SSOT - Single Source of Truth
OTL - Open Tree of life
IDSM - Integrated Database of Small Molecules
SMILES - Simplified Molecular Input Line Entry System (represents chemical structures in a linear string) BNICE - Biochemical Network Integated Computational Explorer (enzymatic algorythms)
KEGG - Kyoto Encyclopedia of Genes and Genomes (database)
SMARTS - "SMiles ARbitrary Target Specification" SMIRKS - "Simplified Molecular Input Line Entry System" is a hybrid of SMILES and SMARTS. It represent reactions in a string. FP2 - Fingerprints
FP4 - Fingerprints
MINEs - Metabolic In silico Network Expansions (predicted enzyme promiscuity products - database) BAM - Biotransformation-based Annotation Method
COMMONS Lab - COMputational Metabolomics & Open science for Natural products reSearch
SMART - (Simple Modular Architecture Research Tool) is a used for the identification and annotation of protein domains within protein sequences.
*.sdf - text-based file for storing chemical information (structure, ...).

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Keywords